skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.


Search for: All records

Creators/Authors contains: "Robinson, John"

Note: When clicking on a Digital Object Identifier (DOI) number, you will be taken to an external site maintained by the publisher. Some full text articles may not yet be available without a charge during the embargo (administrative interval).
What is a DOI Number?

Some links on this page may take you to non-federal websites. Their policies may differ from this site.

  1. The emergence of engineered living materials (ELMs) has led to the development of functional composites by combining living microorganisms with nonliving components, particularly hydrogels. Hydrogels, which mimic the extracellular matrix, support microbial growth by providing essential nutrients and promoting cell adhesion, making them ideal for ELM production. However, hydrogel-based materials often face challenges in three-dimensional printing due to poor structural integrity and limited printability, frequently requiring additional processes, precise control, and/or material modifications to enhance their printing performance. This study focuses on developing a microorganism-laden gelatin microgel and gelatin solution-based composite bioink for self-supported printing of ELMs, enhanced via microbial-induced calcium carbonate precipitation. Gelatin microgels are utilized as rheology modifiers, enabling the yield-stress fluid behavior of the bioink for improved printability and postprinting shape retention, while transglutaminase enzymatically cross-links printed structures completely, resulting in good printability. Furthermore, Sporosarcina pasteurii in the bioink enables calcium carbonate deposition during postprinting culturing, forming robust, biomineralized structures. Fabricated samples are found to have significant successful mineral deposition with over 50 wt% calcium carbonate content, and they exhibit compressive strengths of up to 1.4 MPa. This approach offers a cost-effective, energy-efficient method for creating high-strength, biocompatible biocomposites with potential applications such as bone tissue engineering, coral restoration, and sustainable building development. 
    more » « less
    Free, publicly-accessible full text available September 1, 2026
  2. Climate change poses a threat to biodiversity, and it is unclear whether species can adapt to or tolerate new conditions, or migrate to areas with suitable habitats. Reconstructions of range shifts that occurred in response to environmental changes since the last glacial maximum (LGM) from species distribution models (SDMs) can provide useful data to inform conservation efforts. However, different SDM algorithms and climate reconstructions often produce contrasting patterns, and validation methods typically focus on accuracy in recreating current distributions, limiting their relevance for assessing predictions to the past or future. We modeled historically suitable habitat for the threatened North American tree green ashFraxinus pennsylvanicausing 24 SDMs built using two climate models, three calibration regions, and four modeling algorithms. We evaluated the SDMs using contemporary data with spatial block cross‐validation and compared the relative support for alternative models using a novel integrative method based on coupled demographic‐genetic simulations. We simulated genomic datasets using habitat suitability of each of the 24 SDMs in a spatially‐explicit model. Approximate Bayesian computation (ABC) was then used to evaluate the support for alternative SDMs through comparisons to an empirical population genomic dataset. Models had very similar performance when assessed with contemporary occurrences using spatial cross‐validation, but ABC model selection analyses consistently supported SDMs based on the CCSM climate model, an intermediate calibration extent, and the generalized linear modeling algorithm. Finally, we projected the future range of green ash under four climate change scenarios. Future projections using the SDMs selected via ABC suggest only minor shifts in suitable habitat for this species, while some of those that were rejected predicted dramatic changes. Our results highlight the different inferences that may result from the application of alternative distribution modeling algorithms and provide a novel approach for selecting among a set of competing SDMs with independent data. 
    more » « less
  3. Quantum machine learning has gained considerable attention as quantum technology advances, presenting a promising approach for efficiently learning complex data patterns. Despite this promise, most contemporary quantum methods require significant resources for variational parameter optimization and face issues with vanishing gradients, leading to experiments that are either limited in scale or lack potential for quantum advantage. To address this, we develop a general-purpose, gradient-free, and scalable quantum reservoir learning algorithm that harnesses the quantum dynamics of neutral-atom analog quantum computers to process data. We experimentally implement the algorithm, achieving competitive performance across various categories of machine learning tasks, including binary and multi-class classification, as well as timeseries prediction. Effective and improving learning is observed with increasing system sizes of up to 108 qubits, demonstrating the largest quantum machine learning experiment to date. We further observe comparative quantum kernel advantage in learning tasks by constructing synthetic datasets based on the geometric differences between generated quantum and classical data kernels. Our findings demonstrate the potential of utilizing classically intractable quantum correlations for effective machine learning. We expect these results to stimulate further extensions to different quantum hardware and machine learning paradigms, including early fault-tolerant hardware and generative machine learning tasks 
    more » « less
  4. null (Ed.)
  5. Abstract AimBiogeographers have used three primary data types to examine shifts in tree ranges in response to past climate change: fossil pollen, genetic data and contemporary occurrences. Although recent efforts have explored formal integration of these types of data, we have limited understanding of how integration affects estimates of range shift rates and their uncertainty. We compared estimates of biotic velocity (i.e. rate of species' range shifts) using each data type independently to estimates obtained using integrated models. LocationEastern North America. TaxonFraxinus pennsylvanicaMarshall (green ash). MethodsUsing fossil pollen, genomic data and modern occurrence data, we estimated biotic velocities directly from 24 species distribution models (SDMs) and 200 pollen surfaces created with a novel Bayesian spatio‐temporal model. We compared biotic velocity from these analyses to estimates based on coupled demographic‐coalescent simulations and Approximate Bayesian Computation that combined fossil pollen and SDMs with population genomic data collected across theF. pennsylvanicarange. ResultsPatterns and magnitude of biotic velocity over time varied by the method used to estimate past range dynamics. Estimates based on fossil pollen yielded the highest rates of range movement. Overall, integrating genetic data with other data types in our simulation‐based framework reduced apparent uncertainty in biotic velocity estimates and resulted in greater similarity in estimates between SDM‐ and pollen‐integrated analyses. Main ConclusionsBy reducing uncertainty in our assessments of range shifts, integration of data types improves our understanding of the past distribution of species. Based on these results, we propose further steps to reach the integration of these three lines of biogeographical evidence into a unified analytical framework. 
    more » « less